STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114844030Small conductance calcium-activated potassium channel protein 2-like. (1027 aa)    
Predicted Functional Partners:
LOC114870627
Calcium-activated potassium channel subunit alpha-1.
     
 0.812
kcnn4
Potassium calcium-activated channel subfamily N member 4.
  
  
0.789
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.766
kcnj13
Potassium inwardly rectifying channel subfamily J member 13.
   
 
 0.683
calm3
Calmodulin 3.
    
 
 0.662
LOC114849035
Calmodulin.
    
 
 0.662
LOC114849214
Calmodulin.
    
 
 0.662
kcnmb3
Potassium calcium-activated channel subfamily M regulatory beta subunit 3.
     
 0.651
lipt2
Lipoyl(octanoyl) transferase 2.
     
 0.650
ENSBSLP00000004477
Si:ch211-247n2.1.
     
 0.632
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.