STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDA1DET1- and DDB1-associated protein 1-like. (112 aa)    
Predicted Functional Partners:
ddb1
Damage specific DNA binding protein 1.
    
 0.989
dcaf15
DDB1 and CUL4 associated factor 15.
    
 0.980
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
 0.949
ambra1
Autophagy and beclin 1 regulator 1.
    
 0.936
cul4a
Cullin 4A.
    
 0.926
cul4b
Cullin 4B.
    
 0.926
ddb2
Damage specific DNA binding protein 2.
    
 0.914
ENSBSLP00000031314
Zgc:110843.
    
 0.910
LOC114855470
DDB1- and CUL4-associated factor 1-like.
    
 0.904
DCAF1
DDB1 and CUL4 associated factor 1.
    
 0.904
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.