STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861740Protein arginine N-methyltransferase 8-B. (403 aa)    
Predicted Functional Partners:
rps2
Ribosomal protein S2.
   
 0.893
prmt5
Protein arginine methyltransferase 5.
   
 0.866
LOC114869661
Forkhead box protein O1-A-like.
    
 0.813
wdr77
WD repeat domain 77.
  
 0.813
ENSBSLP00000050458
Small nuclear ribonucleoprotein D3 polypeptide, like.
   
 0.807
LOC114865575
Forkhead box protein O6-like.
    
  0.806
LOC114843170
Forkhead box protein O1-B-like.
    
  0.806
clns1a
Chloride nucleotide-sensitive channel 1A.
   
 0.802
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.793
nhp2
NHP2 ribonucleoprotein.
   
 0.788
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.