STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114848679Syntaxin-11-like. (294 aa)    
Predicted Functional Partners:
LOC114866026
Regulating synaptic membrane exocytosis protein 2-like.
     
 0.984
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.984
snap23
Synaptosome associated protein 23.
   
 0.953
vamp4
Vesicle associated membrane protein 4.
    
 0.939
vamp7
Vesicle associated membrane protein 7.
    
 0.931
snap29
Synaptosome associated protein 29.
   
 0.930
stx16
Syntaxin 16.
    
 0.929
LOC114862899
Vesicle-associated membrane protein 8-like.
    
 0.929
stx8
Syntaxin 8.
    
 0.922
LOC114844455
Vesicle-trafficking protein SEC22b-like.
    
 0.915
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.