STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cxcr5C-X-C motif chemokine receptor 5. (365 aa)    
Predicted Functional Partners:
LOC114861258
Permeability factor 2-like.
    
 0.940
LOC114862058
C-C motif chemokine 8-like.
   
 0.916
cxcl14
C-X-C motif chemokine ligand 14.
     
 0.900
LOC114857950
Monocyte chemotactic protein 1B-like.
    
 0.882
LOC114853061
C-C motif chemokine 25-like.
    
 0.880
ENSBSLP00000049639
annotation not available
    
 0.861
LOC114853818
Stromal cell-derived factor 1-like.
    
 0.857
ENSBSLP00000036437
annotation not available
    
 0.857
ENSBSLP00000036470
annotation not available
    
 0.857
LOC114841789
Stromal cell-derived factor 1-like.
    
 0.857
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.