STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp5cProtein phosphatase 5 catalytic subunit. (531 aa)    
Predicted Functional Partners:
tsc1
TSC complex subunit 1.
   
 0.992
hsp90ab1
Heat shock protein 90 alpha family class B member 1.
   
 0.983
hsp90b1
Heat shock protein 90 beta family member 1.
    
 0.983
LOC114849323
Heat shock protein HSP 90-alpha 1.
   
 0.983
LOC114859294
Prostaglandin E synthase 3-like.
    
 0.979
ptges3
Prostaglandin E synthase 3.
    
 0.979
CDC37
Cell division cycle 37.
    
 0.976
cdc37l1
Cell division cycle 37 like 1.
    
 0.976
trap1
TNF receptor associated protein 1.
   
 0.969
ENSBSLP00000008247
annotation not available
   
 0.966
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.