STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eml2EMAP like 2. (812 aa)    
Predicted Functional Partners:
mad2l1
Mitotic arrest deficient 2 like 1.
   
 0.850
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.809
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.802
ift140
Intraflagellar transport 140.
    
 0.801
ENSBSLP00000023484
annotation not available
   
 0.793
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
 0.793
LOC114869055
Transcription initiation factor TFIID subunit 9-like.
    
 0.786
taf12
TATA-box binding protein associated factor 12.
   
 0.786
taf10
TATA-box binding protein associated factor 10.
    
 0.785
cdc16
Cell division cycle 16.
   
 0.782
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.