STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOR77570.1Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1174 aa)    
Predicted Functional Partners:
AOR78666.1
Cellulose synthase catalytic subunit (UDP-forming); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
AOR77568.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
AOR77571.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.940
AOR77569.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.756
AOR75401.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.742
AOR77572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.731
AOR75552.1
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.690
AOR75375.1
Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.688
AOR76984.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.688
Your Current Organism:
Novosphingobium resinovorum
NCBI taxonomy Id: 158500
Other names: ATCC 33545, CCUG 33446 A, CCUG 33446 B, CIP 105288 [[Novosphingobium subarcticum]], DSM 10700 [[Novosphingobium subarcticum]], DSM 7478, Flavobacterium resinovorum, HAMBI 2110 [[Novosphingobium subarcticum]], JCM 10398 [[Novosphingobium subarcticum]], LMG 8367, LMG:8367, N. resinovorum, NBRC 16058 [[Novosphingobium subarcticum]], NCIMB 8767, Novosphingobium subarcticum, Pseudomonas KF1, Pseudomonas KF3, Pseudomonas NKF1, Sphingomonas subarctica, strain KF1 [[Novosphingobium subarcticum]]
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