STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJF72318.1GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
KJF72317.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.847
KJF74624.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
KJF75405.1
GltA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.694
KJF70546.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.694
KJF73221.1
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.686
KJF71062.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.629
KJF75130.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.576
KJF75054.1
Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.574
argD
Acetylornithine aminotransferase; Catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
     
 0.573
KJF72058.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.570
Your Current Organism:
Agrobacterium arsenijevicii
NCBI taxonomy Id: 1585697
Other names: A. arsenijevicii, Agrobacterium sp. AL51.1, Agrobacterium sp. KFB 330, CFBP 8308, LMG 28674, LMG:28674, Rhizobium sp. KFB 330, strain KFB 330
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.