STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000829905_00259Unannotated protein. (180 aa)    
Predicted Functional Partners:
GCA_000829905_01759
Unannotated protein.
 
    0.893
GCA_000829905_00610
Unannotated protein.
    
 0.885
GCA_000829905_00174
Unannotated protein.
 
 
  0.868
GCA_000829905_01809
Unannotated protein.
 
 
  0.859
GCA_000829905_02389
Unannotated protein.
  
     0.769
GCA_000829905_01653
Unannotated protein.
  
     0.764
GCA_000829905_01967
Unannotated protein.
  
     0.763
GCA_000829905_01179
Unannotated protein.
  
     0.746
GCA_000829905_01633
Unannotated protein.
 
    0.736
GCA_000829905_01337
Unannotated protein.
    
  0.725
Your Current Organism:
Beduini massiliensis
NCBI taxonomy Id: 1585974
Other names: B. massiliensis, CSUR P1440, Clostridiaceae bacterium GM1, DSM 100188, strain GM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.