STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000829905_01883Unannotated protein. (87 aa)    
Predicted Functional Partners:
GCA_000829905_01884
Unannotated protein.
 
  
 0.947
GCA_000829905_00518
Unannotated protein.
  
  
 0.681
GCA_000829905_00760
Unannotated protein.
  
  
 0.616
GCA_000829905_01332
Unannotated protein.
  
  
 0.616
GCA_000829905_00736
Unannotated protein.
    
   0.599
GCA_000829905_01025
Unannotated protein.
    
   0.599
GCA_000829905_01882
Unannotated protein.
       0.556
GCA_000829905_01885
Unannotated protein.
       0.515
GCA_000829905_01881
Unannotated protein.
       0.503
GCA_000829905_01879
Unannotated protein.
       0.500
Your Current Organism:
Beduini massiliensis
NCBI taxonomy Id: 1585974
Other names: B. massiliensis, CSUR P1440, Clostridiaceae bacterium GM1, DSM 100188, strain GM1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.