STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v211702AP-1 complex subunit gamma. (849 aa)    
Predicted Functional Partners:
DHEL01_v210376
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.999
DHEL01_v202362
AP-1 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.999
DHEL01_v201393
Adaptor complexes medium subunit family protein; Belongs to the adaptor complexes medium subunit family.
   
 0.985
DHEL01_v206034
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.984
DHEL01_v201860
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.984
DHEL01_v200606
Adaptor complexes medium subunit family protein; Belongs to the adaptor complexes medium subunit family.
   
 0.983
DHEL01_v202068
ADP-ribosylation factor.
    
 0.980
DHEL01_v205076
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.979
DHEL01_v204175
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
0.966
DHEL01_v204176
Rad60-SLD_2 domain-containing protein.
   
 0.966
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.