DHEL01_v211118 protein (Diaporthe helianthi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DHEL01_v211118

Beta-ketoacyl synthase domain-containing protein. (787 aa)

Predicted Functional Partners:

DHEL01_v201071

0.873

DHEL01_v211857

0.852

DHEL01_v205687

0.689

DHEL01_v206202

0.621

DHEL01_v200765

0.620

DHEL01_v211122

0.608

DHEL01_v210995

0.566

DHEL01_v200614

0.560

DHEL01_v203238

0.551

DHEL01_v201742

0.503

Your Current Organism:

Diaporthe helianthi

NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHEL01_v200614	DHEL01_v201742	A0A2P5IEQ9	A0A2P5IBH9	Malonyl CoA-acyl carrier protein transacylase.	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.929
DHEL01_v200614	DHEL01_v206202	A0A2P5IEQ9	A0A2P5HYT1	Malonyl CoA-acyl carrier protein transacylase.	Thioesterase superfamily protein.	0.971
DHEL01_v200614	DHEL01_v211118	A0A2P5IEQ9	A0A2P5HJP7	Malonyl CoA-acyl carrier protein transacylase.	Beta-ketoacyl synthase domain-containing protein.	0.560
DHEL01_v200765	DHEL01_v201742	A0A2P5IEB7	A0A2P5IBH9	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase.	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.480
DHEL01_v200765	DHEL01_v211118	A0A2P5IEB7	A0A2P5HJP7	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase.	Beta-ketoacyl synthase domain-containing protein.	0.620
DHEL01_v201071	DHEL01_v201742	A0A2P5IDE9	A0A2P5IBH9	Amino acid adenylation domain-containing protein.	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.587
DHEL01_v201071	DHEL01_v211118	A0A2P5IDE9	A0A2P5HJP7	Amino acid adenylation domain-containing protein.	Beta-ketoacyl synthase domain-containing protein.	0.873
DHEL01_v201742	DHEL01_v200614	A0A2P5IBH9	A0A2P5IEQ9	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Malonyl CoA-acyl carrier protein transacylase.	0.929
DHEL01_v201742	DHEL01_v200765	A0A2P5IBH9	A0A2P5IEB7	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase.	0.480
DHEL01_v201742	DHEL01_v201071	A0A2P5IBH9	A0A2P5IDE9	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Amino acid adenylation domain-containing protein.	0.587
DHEL01_v201742	DHEL01_v203238	A0A2P5IBH9	A0A2P5I7B4	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Nonribosomal peptide synthetase 6.	0.472
DHEL01_v201742	DHEL01_v205687	A0A2P5IBH9	A0A2P5I0A0	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Alcohol dehydrogenase.	0.706
DHEL01_v201742	DHEL01_v206202	A0A2P5IBH9	A0A2P5HYT1	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Thioesterase superfamily protein.	0.743
DHEL01_v201742	DHEL01_v210995	A0A2P5IBH9	A0A2P5HK63	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Lysine-3.	0.482
DHEL01_v201742	DHEL01_v211118	A0A2P5IBH9	A0A2P5HJP7	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Beta-ketoacyl synthase domain-containing protein.	0.503
DHEL01_v201742	DHEL01_v211122	A0A2P5IBH9	A0A2P5HJR2	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Lovastatin nonaketide synthase.	0.493
DHEL01_v201742	DHEL01_v211857	A0A2P5IBH9	A0A2P5HHM2	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Carrier domain-containing protein.	0.713
DHEL01_v203238	DHEL01_v201742	A0A2P5I7B4	A0A2P5IBH9	Nonribosomal peptide synthetase 6.	PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.472
DHEL01_v203238	DHEL01_v211118	A0A2P5I7B4	A0A2P5HJP7	Nonribosomal peptide synthetase 6.	Beta-ketoacyl synthase domain-containing protein.	0.551
DHEL01_v203238	DHEL01_v211857	A0A2P5I7B4	A0A2P5HHM2	Nonribosomal peptide synthetase 6.	Carrier domain-containing protein.	0.519