DHEL01_v210777 protein (Diaporthe helianthi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DHEL01_v210777

Uncharacterized protein. (1138 aa)

Predicted Functional Partners:

DHEL01_v202706

0.602

DHEL01_v200395

0.578

DHEL01_v205572

0.565

DHEL01_v210826

0.555

DHEL01_v206267

0.496

DHEL01_v204521

0.485

DHEL01_v208858

0.484

DHEL01_v205091

0.484

DHEL01_v202422

0.484

DHEL01_v202423

0.484

Your Current Organism:

Diaporthe helianthi

NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHEL01_v200395	DHEL01_v202422	A0A2P5IFA7	A0A2P5I9M1	Prion formation protein 1.	Complex I intermediate-associated protein 30.	0.820
DHEL01_v200395	DHEL01_v202423	A0A2P5IFA7	A0A2P5I9M5	Prion formation protein 1.	BZIP domain-containing protein.	0.820
DHEL01_v200395	DHEL01_v205091	A0A2P5IFA7	A0A2P5I221	Prion formation protein 1.	Ubiquitin-40S ribosomal protein S27a.	0.820
DHEL01_v200395	DHEL01_v206267	A0A2P5IFA7	A0A2P5HYL1	Prion formation protein 1.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.974
DHEL01_v200395	DHEL01_v210777	A0A2P5IFA7	A0A2P5HKP9	Prion formation protein 1.	Uncharacterized protein.	0.578
DHEL01_v200395	DHEL01_v210826	A0A2P5IFA7	A0A2P5HKM4	Prion formation protein 1.	ABC transporter.	0.995
DHEL01_v202422	DHEL01_v200395	A0A2P5I9M1	A0A2P5IFA7	Complex I intermediate-associated protein 30.	Prion formation protein 1.	0.820
DHEL01_v202422	DHEL01_v206267	A0A2P5I9M1	A0A2P5HYL1	Complex I intermediate-associated protein 30.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.990
DHEL01_v202422	DHEL01_v210777	A0A2P5I9M1	A0A2P5HKP9	Complex I intermediate-associated protein 30.	Uncharacterized protein.	0.484
DHEL01_v202422	DHEL01_v210826	A0A2P5I9M1	A0A2P5HKM4	Complex I intermediate-associated protein 30.	ABC transporter.	0.934
DHEL01_v202423	DHEL01_v200395	A0A2P5I9M5	A0A2P5IFA7	BZIP domain-containing protein.	Prion formation protein 1.	0.820
DHEL01_v202423	DHEL01_v206267	A0A2P5I9M5	A0A2P5HYL1	BZIP domain-containing protein.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.986
DHEL01_v202423	DHEL01_v210777	A0A2P5I9M5	A0A2P5HKP9	BZIP domain-containing protein.	Uncharacterized protein.	0.484
DHEL01_v202423	DHEL01_v210826	A0A2P5I9M5	A0A2P5HKM4	BZIP domain-containing protein.	ABC transporter.	0.934
DHEL01_v202706	DHEL01_v208858	A0A2P5I8S8	A0A2P5HR99	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	0.997
DHEL01_v202706	DHEL01_v210777	A0A2P5I8S8	A0A2P5HKP9	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.	Uncharacterized protein.	0.602
DHEL01_v204521	DHEL01_v210777	A0A2P5I3N0	A0A2P5HKP9	Uncharacterized protein.	Uncharacterized protein.	0.485
DHEL01_v205091	DHEL01_v200395	A0A2P5I221	A0A2P5IFA7	Ubiquitin-40S ribosomal protein S27a.	Prion formation protein 1.	0.820
DHEL01_v205091	DHEL01_v206267	A0A2P5I221	A0A2P5HYL1	Ubiquitin-40S ribosomal protein S27a.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.995
DHEL01_v205091	DHEL01_v210777	A0A2P5I221	A0A2P5HKP9	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.484