STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v209895ANK_REP_REGION domain-containing protein. (651 aa)    
Predicted Functional Partners:
DHEL01_v201819
Cell division control protein Cdc48; Belongs to the AAA ATPase family.
    
 
 0.930
DHEL01_v200446
Uncharacterized protein.
   
 
 0.904
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
   0.859
DHEL01_v212277
ATPase.
    
 
 0.707
DHEL01_v209077
AAA domain-containing protein.
    
 
 0.707
DHEL01_v203420
AAA domain-containing protein.
    
 
 0.707
DHEL01_v200196
ATPase.
    
 
 0.707
DHEL01_v209820
Ubiquitin elongating factor core.
    
 
 0.686
DHEL01_v202088
Uncharacterized protein.
   
 
 0.685
DHEL01_v211024
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.655
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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