STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v208679Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
DHEL01_v212165
Ribonuclease P protein subunit.
    
 0.998
DHEL01_v200900
Rpp14 family protein.
   
 0.997
DHEL01_v200381
POPLD domain-containing protein.
    
 0.996
DHEL01_v200811
RNase P subunit p30.
   
 0.994
DHEL01_v212251
Ribonuclease P 40kDa subunit.
    
 0.990
DHEL01_v200405
Uncharacterized protein.
    
 0.989
DHEL01_v206815
Uncharacterized protein.
   
  0.979
DHEL01_v209388
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.949
DHEL01_v201711
Ribosome biogenesis protein Kri1.
   
  0.944
DHEL01_v212303
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 
  0.939
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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