STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1061 aa)    
Predicted Functional Partners:
DHEL01_v206918
Ribosome biogenesis protein BMS1.
   
 
 0.999
DHEL01_v211107
WD_REPEATS_REGION domain-containing protein.
   
 
 0.998
DHEL01_v209044
Nucleolar protein.
   
 
 0.998
DHEL01_v208956
U3 small nucleolar RNA-associated protein 22.
   
 
 0.998
DHEL01_v207040
Nop14-like family protein.
   
 
 0.998
DHEL01_v205857
NUC153 domain-containing protein.
   
 
 0.998
DHEL01_v205260
Uncharacterized protein.
   
 
 0.998
DHEL01_v200545
DRIM domain-containing protein.
   
 
 0.998
DHEL01_v211720
WD repeat containing protein 36.
   
 
 0.997
DHEL01_v205665
U3 small nucleolar RNA-associated protein 7.
   
 
 0.997
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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