STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v206744RING-type domain-containing protein. (1628 aa)    
Predicted Functional Partners:
DHEL01_v201381
HECT-domain-containing protein.
   
 
 0.980
DHEL01_v202088
Uncharacterized protein.
    
 
 0.954
DHEL01_v200114
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
   0.855
DHEL01_v209270
Ribosomal protein L23.
    
 
 0.847
DHEL01_v201772
60S ribosomal protein L2.
    
   0.828
DHEL01_v207115
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.827
DHEL01_v205598
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
    
   0.818
DHEL01_v209293
60S ribosomal protein L9.
   
   0.817
DHEL01_v212866
Cycloheximide resistant-2; Belongs to the universal ribosomal protein uL15 family.
    
   0.805
DHEL01_v209095
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.805
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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