STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v206470Beta-lactamase domain-containing protein. (555 aa)    
Predicted Functional Partners:
DHEL01_v200825
Glycerophosphocholine phosphodiesterase Gde1.
    
 0.823
DHEL01_v207871
Oxidoreductase NAD-binding domain-containing protein.
    
  0.820
DHEL01_v203220
Nitrate reductase.
    
  0.820
DHEL01_v200545
DRIM domain-containing protein.
   
  0.607
DHEL01_v208164
Utp12 domain-containing protein.
    
  0.577
DHEL01_v210112
Wdr1p.
    
  0.572
DHEL01_v209044
Nucleolar protein.
    
  0.572
DHEL01_v204217
WD_REPEATS_REGION domain-containing protein.
   
  0.569
DHEL01_v210965
U3 small nucleolar RNA-associated protein 15.
   
  0.566
DHEL01_v203598
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.560
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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