STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v206138Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
DHEL01_v201381
HECT-domain-containing protein.
   
 
 0.756
DHEL01_v209525
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
    
 0.751
DHEL01_v207117
Peroxin 5.
    
 0.699
DHEL01_v205091
Ubiquitin-40S ribosomal protein S27a.
    
  0.601
DHEL01_v202422
Complex I intermediate-associated protein 30.
    
  0.601
DHEL01_v202423
BZIP domain-containing protein.
    
  0.601
DHEL01_v206034
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
  0.521
DHEL01_v212775
Ubiquitin family protein.
    
  0.514
DHEL01_v209449
UV excision repair protein Rad23.
    
  0.514
DHEL01_v207988
Ubiquitin.
    
  0.514
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.