STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v204636Uncharacterized protein. (692 aa)    
Predicted Functional Partners:
DHEL01_v209546
Pre-mRNA-splicing factor clf-1.
   
 0.969
DHEL01_v208942
Pre-mRNA-splicing factor syf-1.
   
 0.966
DHEL01_v201776
Cell cycle control protein cwf14.
    
 0.961
DHEL01_v206442
Pre-mRNA-splicing factor slt-11.
   
 0.959
DHEL01_v201730
Isy1-like splicing family protein.
    
 0.953
DHEL01_v201356
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
  0.944
DHEL01_v208307
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.940
DHEL01_v205364
Peptidyl-prolyl cis-trans isomerase E.
   
 0.933
DHEL01_v202337
Pre-mRNA-splicing factor cef-1.
   
 
 0.932
DHEL01_v207095
Peptidyl-prolyl isomerase CWC27.
   
 0.914
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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