STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v203836Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (403 aa)    
Predicted Functional Partners:
DHEL01_v202770
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.977
DHEL01_v209270
Ribosomal protein L23.
  
 
 0.917
DHEL01_v208429
60S ribosomal protein L35.
  
 
 0.911
DHEL01_v201059
Cytoplasmic ribosomal protein-4.
  
 
 0.911
DHEL01_v200050
60S ribosomal protein L7.
  
 
 0.910
DHEL01_v203921
60S ribosomal protein L26.
  
   0.897
DHEL01_v202221
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.896
DHEL01_v205109
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.880
DHEL01_v206267
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.855
DHEL01_v204684
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.855
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.