STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v203525Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
DHEL01_v211142
WD domain-containing protein.
   
  0.571
DHEL01_v203899
Pre-rRNA-processing protein IPI1.
    
 0.560
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.520
DHEL01_v200051
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.491
DHEL01_v209220
GTP-binding protein.
   
  0.477
DHEL01_v204849
50S ribosomal protein L2.
    
  0.468
DHEL01_v210840
Uncharacterized protein.
  
 
   0.461
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.458
DHEL01_v206754
Uncharacterized protein.
    
  0.456
DHEL01_v203804
CLP1_P domain-containing protein.
    
  0.450
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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