STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v203338SH3 domain-containing protein. (409 aa)    
Predicted Functional Partners:
DHEL01_v202069
SH3 domain-containing protein.
    
 
 0.913
DHEL01_v209094
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
    
   0.885
DHEL01_v211734
WH1 domain-containing protein.
    
 
 0.875
DHEL01_v207029
WH1 domain-containing protein.
    
 
 0.875
DHEL01_v212993
CUE domain-containing protein.
    
   0.825
DHEL01_v203359
Polygalacturonase.
    
 
 0.632
DHEL01_v210125
VHS domain-containing protein.
   
 
 0.624
DHEL01_v203336
Arf-GAP domain-containing protein.
    
 
 0.601
DHEL01_v203970
Actin.
    
 
 0.501
DHEL01_v207471
TRAPP complex protein TRS85.
    
  0.484
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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