STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v203028Oxidoreductase. (327 aa)    
Predicted Functional Partners:
DHEL01_v212188
WD_REPEATS_REGION domain-containing protein.
    
 0.652
DHEL01_v202338
Ash2-trithorax family protein.
    
 0.647
DHEL01_v201199
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.622
DHEL01_v205556
Amidase domain-containing protein.
    
 0.620
DHEL01_v200609
Uncharacterized protein.
    
 0.617
DHEL01_v201545
Protein transporter sec-13; Belongs to the WD repeat SEC13 family.
    
 0.600
DHEL01_v202124
UBA/TS-N domain-containing protein.
    
  0.599
DHEL01_v211424
Serine/threonine-protein kinase 12.
    
 0.594
DHEL01_v206919
WD domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.582
DHEL01_v207988
Ubiquitin.
    
  0.565
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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