STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v202691Pectate lyase. (257 aa)    
Predicted Functional Partners:
DHEL01_v208397
Pectate lyase.
  
  
 
0.810
DHEL01_v208206
Pectate lyase.
  
  
 
0.804
DHEL01_v207978
Alpha-galactosidase; Hydrolyzes a variety of simple alpha-D-galactoside as well as more complex molecules such as oligosaccharides and polysaccharides. Belongs to the glycosyl hydrolase.
     
 0.793
DHEL01_v209249
Pectate lyase F.
  
  
 
0.710
DHEL01_v210876
Pectate lyase F.
  
  
 
0.703
DHEL01_v209863
Pectate lyase A.
  
  
 
0.613
DHEL01_v209728
Pectate lyase 2.
  
  
 0.599
DHEL01_v207427
Pectate lyase D.
  
  
 
0.595
DHEL01_v205180
Pectate lyase.
  
  
 0.594
DHEL01_v211849
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
     
 0.567
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.