STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v202253Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
DHEL01_v201986
Low-temperature viability protein ltv1.
    
 0.959
DHEL01_v200921
Uncharacterized protein.
    
 0.889
DHEL01_v208318
Serine/threonine-protein kinase RIO2.
    
 0.883
DHEL01_v205666
Bms1-type G domain-containing protein.
    
 0.862
DHEL01_v212303
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.820
DHEL01_v205109
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.804
DHEL01_v209388
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.756
DHEL01_v205467
40S ribosomal protein S20.
    
 0.748
DHEL01_v209818
Uncharacterized protein.
    
  0.740
DHEL01_v203790
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.740
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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