STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHEL01_v201020Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (223 aa)    
Predicted Functional Partners:
DHEL01_v210738
Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family.
   
 0.988
DHEL01_v213092
RING-box protein 1.
    
 0.982
DHEL01_v211097
Cullin 1; Belongs to the cullin family.
    
 0.964
DHEL01_v200547
Cullin-3; Belongs to the cullin family.
    
 0.958
DHEL01_v210685
AN1-type domain-containing protein.
   
 0.957
DHEL01_v203058
60S ribosomal protein L40.
   
 0.957
DHEL01_v201381
HECT-domain-containing protein.
    
 0.954
DHEL01_v205091
Ubiquitin-40S ribosomal protein S27a.
    
 0.942
DHEL01_v202422
Complex I intermediate-associated protein 30.
    
 0.942
DHEL01_v202423
BZIP domain-containing protein.
    
 0.942
Your Current Organism:
Diaporthe helianthi
NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.