DHEL01_v200478 protein (Diaporthe helianthi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DHEL01_v200478

Uncharacterized protein. (519 aa)

Predicted Functional Partners:

DHEL01_v203102

0.874

DHEL01_v212209

0.836

DHEL01_v206875

0.836

DHEL01_v201267

0.836

DHEL01_v201116

0.836

DHEL01_v203847

0.680

DHEL01_v211574

0.671

DHEL01_v205951

0.671

DHEL01_v211039

0.571

DHEL01_v202786

0.571

Your Current Organism:

Diaporthe helianthi

NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHEL01_v200478	DHEL01_v201116	A0A2P5IF27	A0A2P5IDB0	Uncharacterized protein.	Uncharacterized protein.	0.836
DHEL01_v200478	DHEL01_v201267	A0A2P5IF27	A0A2P5ICV8	Uncharacterized protein.	Uncharacterized protein.	0.836
DHEL01_v200478	DHEL01_v202786	A0A2P5IF27	A0A2P5I8K8	Uncharacterized protein.	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.	0.571
DHEL01_v200478	DHEL01_v203102	A0A2P5IF27	A0A2P5I7M1	Uncharacterized protein.	Complex I intermediate-associated protein 30.	0.874
DHEL01_v200478	DHEL01_v203847	A0A2P5IF27	A0A2P5I5H5	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit tim10.	0.680
DHEL01_v200478	DHEL01_v205951	A0A2P5IF27	A0A2P5HZI6	Uncharacterized protein.	1-acyl-sn-glycerol-3-phosphate acyltransferase.	0.671
DHEL01_v200478	DHEL01_v206875	A0A2P5IF27	A0A2P5HWV2	Uncharacterized protein.	Cardiolipin synthetase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.836
DHEL01_v200478	DHEL01_v211039	A0A2P5IF27	A0A2P5HK12	Uncharacterized protein.	Acyltransferase.	0.571
DHEL01_v200478	DHEL01_v211574	A0A2P5IF27	A0A2P5HIG6	Uncharacterized protein.	Acyltransferase.	0.671
DHEL01_v200478	DHEL01_v212209	A0A2P5IF27	A0A2P5HGM1	Uncharacterized protein.	Uncharacterized protein.	0.836
DHEL01_v201116	DHEL01_v200478	A0A2P5IDB0	A0A2P5IF27	Uncharacterized protein.	Uncharacterized protein.	0.836
DHEL01_v201116	DHEL01_v201267	A0A2P5IDB0	A0A2P5ICV8	Uncharacterized protein.	Uncharacterized protein.	0.865
DHEL01_v201116	DHEL01_v202786	A0A2P5IDB0	A0A2P5I8K8	Uncharacterized protein.	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.	0.867
DHEL01_v201116	DHEL01_v205951	A0A2P5IDB0	A0A2P5HZI6	Uncharacterized protein.	1-acyl-sn-glycerol-3-phosphate acyltransferase.	0.863
DHEL01_v201116	DHEL01_v206875	A0A2P5IDB0	A0A2P5HWV2	Uncharacterized protein.	Cardiolipin synthetase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.866
DHEL01_v201116	DHEL01_v211039	A0A2P5IDB0	A0A2P5HK12	Uncharacterized protein.	Acyltransferase.	0.863
DHEL01_v201116	DHEL01_v211574	A0A2P5IDB0	A0A2P5HIG6	Uncharacterized protein.	Acyltransferase.	0.863
DHEL01_v201116	DHEL01_v212209	A0A2P5IDB0	A0A2P5HGM1	Uncharacterized protein.	Uncharacterized protein.	0.859
DHEL01_v201267	DHEL01_v200478	A0A2P5ICV8	A0A2P5IF27	Uncharacterized protein.	Uncharacterized protein.	0.836
DHEL01_v201267	DHEL01_v201116	A0A2P5ICV8	A0A2P5IDB0	Uncharacterized protein.	Uncharacterized protein.	0.865