STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418685_01085Unannotated protein. (391 aa)    
Predicted Functional Partners:
GCA_001418685_01084
Unannotated protein.
 
    
0.794
Ga0061079_1012
Unannotated protein.
  
     0.774
GCA_001418685_00575
Unannotated protein.
   
 
 0.593
GCA_001418685_01086
Unannotated protein.
       0.532
GCA_001418685_01991
Unannotated protein.
  
     0.528
Ga0061079_1013
Unannotated protein.
  
     0.482
GCA_001418685_01056
Unannotated protein.
  
    0.460
Ga0061079_1196
Unannotated protein.
  
    0.449
mnmG
Unannotated protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
    
   0.402
Your Current Organism:
Apibacter mensalis
NCBI taxonomy Id: 1586267
Other names: A. mensalis, Apibacter mensalis Praet et al. 2016, Bacteroidetes bacterium LMG 28357, Bacteroidetes bacterium R-53146, DSM 100903, LMG 28357, LMG:28357, strain R-53146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.