STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001418685_01670Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_001418685_00584
Unannotated protein.
  
0.999
GCA_001418685_00594
Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 0.999
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
 
 0.998
GCA_001418685_00631
Unannotated protein.
 
 
 0.987
GCA_001418685_01080
Unannotated protein.
 
 
 0.986
GCA_001418685_00585
Unannotated protein; Belongs to the P-Pant transferase superfamily.
0.983
accD
Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
 
 
 0.975
GCA_001418685_00051
Unannotated protein.
 
 
 0.974
GCA_001418685_00860
Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  0.965
GCA_001418685_01379
Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 0.960
Your Current Organism:
Apibacter mensalis
NCBI taxonomy Id: 1586267
Other names: A. mensalis, Apibacter mensalis Praet et al. 2016, Bacteroidetes bacterium LMG 28357, Bacteroidetes bacterium R-53146, DSM 100903, LMG 28357, LMG:28357, strain R-53146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.