STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ga0061079_1216Unannotated protein. (357 aa)    
Predicted Functional Partners:
GCA_001418685_00868
Unannotated protein; Belongs to the CinA family.
    
 0.748
Ga0061079_1217
Unannotated protein.
       0.682
GCA_001418685_00575
Unannotated protein.
    
 0.633
Ga0061079_1161
Unannotated protein.
       0.544
Ga0061079_1215
Unannotated protein.
       0.435
Ga0061079_1213
Unannotated protein.
  
    0.419
Ga0061079_1214
Unannotated protein.
       0.416
recA
Unannotated protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.407
GCA_001418685_01949
Unannotated protein; Belongs to the peptidase S24 family.
     
 0.404
Your Current Organism:
Apibacter mensalis
NCBI taxonomy Id: 1586267
Other names: A. mensalis, Apibacter mensalis Praet et al. 2016, Bacteroidetes bacterium LMG 28357, Bacteroidetes bacterium R-53146, DSM 100903, LMG 28357, LMG:28357, strain R-53146
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.