STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODP30896.1Stomatin 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)    
Predicted Functional Partners:
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.993
ODP35786.1
Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.894
ODP35787.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
ODP31342.1
Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.855
ODP32573.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.834
ODP33018.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.827
ODP33563.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.827
ODP33421.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.827
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.819
ODP31969.1
Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
   
  0.814
Your Current Organism:
Pandoraea sp. ISTKB
NCBI taxonomy Id: 1586708
Other names: P. sp. ISTKB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.