STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000970675_03154Unannotated protein. (282 aa)    
Predicted Functional Partners:
GCA_000970675_02456
Unannotated protein.
  
  
 0.932
GCA_000970675_03153
Unannotated protein.
 
  
 0.905
GCA_000970675_02146
Unannotated protein.
 
   
 0.832
GCA_000970675_01380
Unannotated protein.
  
  
 0.814
GCA_000970675_01387
Unannotated protein.
  
  
 0.813
GCA_000970675_03152
Unannotated protein.
 
  
 0.813
GCA_000970675_00825
Unannotated protein.
  
   
 0.793
GCA_000970675_03155
Unannotated protein.
       0.773
GCA_000970675_03179
Unannotated protein.
  
   
 0.772
GCA_000970675_00808
Unannotated protein.
  
   
 0.764
Your Current Organism:
Domibacillus tundrae
NCBI taxonomy Id: 1587527
Other names: D. tundrae, DSM 29572, Domibacillus sp. PAMC 80007, Domibacillus tundrae Gyeong et al. 2015, JCM 30371, KCTC 33549, strain PAMC 80007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.