STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSCA_0102Putative oxidoreductase. (328 aa)    
Predicted Functional Partners:
BSCA_1076
Aldo/keto reductase.
  
  
 
0.904
BSCA_2506
Pyridoxine kinase; Belongs to the pyridoxine kinase family.
    
  0.901
BSCA_0424
Aldo/keto reductase.
  
     0.745
BSCA_2216
Voltage-gated potassium channel.
  
     0.745
BSCA_1991
Putative oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.660
BSCA_1179
Oxidoreductase.
 
     0.593
BSCA_0031
Glycerol uptake facilitator protein GlpF; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.449
BSCA_0953
Membrane channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.449
BSCA_1482
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.416
BSCA_0100
Putative MarR-type transcriptional regulator.
  
    0.403
Your Current Organism:
Bifidobacterium scardovii
NCBI taxonomy Id: 158787
Other names: B. scardovii, Bifidobacterium scardovii Hoyles et al. 2002, CCUG 13008 A, DSM 13734, JCM 12489
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.