STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exuT_1Involved in the transport of aldohexuronates; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)    
Predicted Functional Partners:
AIR60583.1
Transcriptional regulator; Regulates the expression of uxuBA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.823
garD
Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.669
uxaC
Glucuronate isomerase; Catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.598
bhsA_5
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
holD
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.507
AIR60125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.488
bhsA_4
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
AIR60581.1
Modulator protein MzrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.453
bhsA_3
Multiple stress resistance protein BhsA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
AIR61536.1
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.444
Your Current Organism:
Cedecea neteri
NCBI taxonomy Id: 158822
Other names: ATCC 33855, C. neteri, CCUG 18763, CDC 0621-75, CIP 103241, Cedecea sp. M006, Cedecea sp. ND02, Cedecea sp. ND14a, Cedecea sp. ND14b, DSM 13693, JCM 7582, LMG 7864, LMG:7864, NBRC 105707, NCTC 12120, strain 002
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