STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB93120.1Putative alpha-ribazole phosphatase; KEGG: med:MELS_1001 4.0e-70 phosphoglycerate mutase family protein; K15634 probable phosphoglycerate mutase; Psort location: Cytoplasmic, score: 9.97. (217 aa)    
Predicted Functional Partners:
cobS
adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.970
KXB93122.1
KEGG: med:MELS_0999 4.3e-41 adenosylcobalamin biosynthesis protein CobU; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.885
KXB93119.1
Pseudouridylate synthase; KEGG: med:MELS_1002 1.8e-65 pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase; Psort location: Cytoplasmic, score: 9.26; Belongs to the pseudouridine synthase RsuA family.
       0.776
KXB92605.1
KEGG: med:MELS_0694 1.3e-101 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.747
KXB90211.1
KEGG: med:MELS_0904 2.2e-218 phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
  0.733
KXB90412.1
L-serine dehydratase, iron-sulfur-dependent, alpha subunit; KEGG: med:MELS_0290 3.7e-99 L-serine dehydratase; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 9.26; Belongs to the iron-sulfur dependent L-serine dehydratase family.
    
  0.721
KXB90411.1
L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: med:MELS_0291 1.1e-88 L-serine dehydratase; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the iron-sulfur dependent L-serine dehydratase family.
    
  0.720
KXB93118.1
KEGG: sth:STH1865 1.1e-69 Xaa-Pro dipeptidase; K01271 Xaa-Pro dipeptidase; Psort location: Cytoplasmic, score: 9.26.
       0.598
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
  0.584
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.577
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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