STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argHKEGG: med:MELS_0096 1.3e-181 argininosuccinate lyase; K01755 argininosuccinate lyase; Psort location: Cytoplasmic, score: 9.97. (477 aa)    
Predicted Functional Partners:
argG
KEGG: med:MELS_0097 1.6e-192 argininosuccinate synthase; K01940 argininosuccinate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 0.999
KXB92603.1
Adenylosuccinate lyase; KEGG: med:MELS_0685 8.1e-198 adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 9.97.
    
 0.891
KXB91668.1
KEGG: med:MELS_2044 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
   
 
  0.889
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 
0.868
KXB93157.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.860
KXB91045.1
KEGG: ckr:CKR_0692 3.3e-66 hypothetical protein; K00240 succinate dehydrogenase iron-sulfur subunit; Psort location: CytoplasmicMembrane, score: 9.82.
     
 0.819
argR
Arginine repressor; Regulates arginine biosynthesis genes.
  
  
 0.768
KXB92361.1
Putative arginine 2-monooxygenase; KEGG: bbe:BBR47_38950 2.2e-92 speA; arginine decarboxylase K01582; Psort location: Cytoplasmic, score: 9.97.
     
 0.737
carB
KEGG: med:MELS_0849 0. carbamoyl-phosphate synthase large chain; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarB family.
  
  
 0.675
KXB92271.1
KEGG: ebe:B21_00795 1.2e-36 glnH; glnH, subunit of glutamine ABC transporter K10036; Psort location: Periplasmic, score: 9.76.
  
  
 0.674
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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