STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB92755.1TonB-dependent receptor; KEGG: ccv:CCV52592_1811 7.2e-10 diaminopimelate epimerase; Psort location: OuterMembrane, score: 9.92. (476 aa)    
Predicted Functional Partners:
KXB91942.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 1.3e-18 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.93.
 
     0.974
KXB90843.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 1.6e-09 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.92.
  
     0.774
KXB90096.1
TonB-dependent receptor; KEGG: xfa:XF0818 7.5e-10 endo-1,4-beta-glucanase; K01179 endoglucanase.
  
   0.659
KXB92659.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 9.4e-05 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.92.
  
     0.648
KXB92660.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 6.8e-07 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.93.
  
     0.633
KXB91938.1
Hypothetical protein.
    
 
 0.620
KXB90199.1
Hypothetical protein; KEGG: rec:RHECIAT_CH0004130 3.4e-05 hypothetical protein K09800.
  
     0.537
KXB90200.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 3.2e-07 fadD; long-chain-fatty-acid--CoA ligase K12543; Psort location: OuterMembrane, score: 9.92.
  
   
 0.529
KXB92661.1
TonB family domain protein.
   
   0.496
KXB90098.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: pfe:PSF113_4167 3.4e-18 exbB; protein ExbB/TolQ K03561; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.474
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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