STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB92778.1HAD hydrolase, family IA, variant 1; KEGG: med:MELS_1157 5.8e-62 haloacid dehalogenase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 9.97. (212 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 8.6e-17 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
    
  0.747
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.737
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.737
KXB92779.1
Peptidase M16 inactive domain protein; KEGG: cbi:CLJ_B3592 3.1e-228 peptidase family protein K06972; Psort location: Cytoplasmic, score: 8.96.
       0.718
KXB92780.1
tRNA ligase class I, catalytic domain protein; KEGG: med:MELS_1159 1.3e-96 glutamyl-tRNA synthetase family protein; K01885 glutamyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.708
KXB91566.1
Hydrolase, NUDIX family; KEGG: med:MELS_2024 3.6e-53 hydrolase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
 
      0.674
KXB91668.1
KEGG: med:MELS_2044 0. pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
     
 0.530
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
 
  0.522
KXB90546.1
KEGG: med:MELS_0569 0. phosphoribosylformylglycinamidine synthase; K01952 phosphoribosylformylglycinamidine synthase; Psort location: CytoplasmicMembrane, score: 8.46.
  
  
 0.470
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
 
  0.466
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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