STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB92779.1Peptidase M16 inactive domain protein; KEGG: cbi:CLJ_B3592 3.1e-228 peptidase family protein K06972; Psort location: Cytoplasmic, score: 8.96. (974 aa)    
Predicted Functional Partners:
KXB92780.1
tRNA ligase class I, catalytic domain protein; KEGG: med:MELS_1159 1.3e-96 glutamyl-tRNA synthetase family protein; K01885 glutamyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.805
KXB92778.1
HAD hydrolase, family IA, variant 1; KEGG: med:MELS_1157 5.8e-62 haloacid dehalogenase; K01091 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 9.97.
       0.718
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
  0.591
KXB91561.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: med:MELS_2028 3.1e-189 mycothione reductase; K00382 dihydrolipoamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
   0.561
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
  0.551
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
    0.508
mraZ
Protein MraZ; Psort location: Cytoplasmic, score: 9.97; Belongs to the MraZ family.
       0.496
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
   0.455
KXB92783.1
Putative cell division protein FtsL.
       0.440
leuS
leucine--tRNA ligase; KEGG: med:MELS_2130 0. leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.427
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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