STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB92657.1Mg chelatase-like protein; KEGG: chu:CHU_0354 1.2e-125 ch1I; magnesium chelatase subunit ChlI K07391; Psort location: Cytoplasmic, score: 9.97. (505 aa)    
Predicted Functional Partners:
KXB92656.1
DNA protecting protein DprA; KEGG: hip:CGSHiEE_07040 2.7e-41 2-isopropylmalate synthase K04096.
 
 0.984
KXB92658.1
TIGR00252 family protein; KEGG: bbb:BIF_00788 1.1e-17 Endonuclease K07460; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0102 family.
 
  
 0.926
KXB90866.1
comF family protein; KEGG: nde:NIDE1089 1.2e-16 putative phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.771
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
      0.745
KXB90751.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 8.7e-09 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.598
KXB92659.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 9.4e-05 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.92.
       0.485
KXB92660.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 6.8e-07 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.93.
       0.463
KXB92661.1
TonB family domain protein.
       0.463
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
      0.426
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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