STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB92688.1KEGG: cya:CYA_1627 2.7e-55 M23B family peptidase; Psort location: OuterMembrane, score: 8.28. (412 aa)    
Predicted Functional Partners:
KXB92687.1
Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.980
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.897
KXB92685.1
KEGG: bai:BAA_0989 1.5e-56 csaB; polysaccharide pyruvyl transferase CsaB; Psort location: Cytoplasmic, score: 8.96.
 
     0.819
KXB92684.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.776
KXB92689.1
Peptidase, S41 family; KEGG: med:MELS_2071 4.9e-72 peptidase; K03797 carboxyl-terminal processing protease; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S41A family.
  
    0.758
KXB91599.1
NlpC/P60 family protein; KEGG: bpu:BPUM_3255 2.6e-23 ywtD; C40 family peptidase.
 
      0.652
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.585
KXB92314.1
KEGG: ain:Acin_0910 4.6e-156 mrcA; penicillin-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.564
KXB92968.1
Transglycosylase; KEGG: bya:BANAU_0939 4.0e-41 pbpF; penicillin-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
   
 0.530
obg
Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.492
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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