STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB92716.1Riboflavin synthase, alpha subunit; KEGG: med:MELS_1752 1.6e-68 riboflavin synthase; K00793 riboflavin synthase; Psort location: Cytoplasmic, score: 9.97. (215 aa)    
Predicted Functional Partners:
KXB92715.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
 0.999
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 0.999
KXB91083.1
GTP cyclohydrolase II; KEGG: med:MELS_0145 2.1e-87 riboflavin biosynthesis protein ribBA; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Psort location: Cytoplasmic, score: 9.97.
 0.999
KXB90894.1
KEGG: med:MELS_1407 2.2e-94 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.950
KXB92265.1
Cof-like hydrolase; KEGG: ppo:PPM_1251 2.1e-32 yxeH; HMP-PP phosphatase K07024; Psort location: Cytoplasmic, score: 8.96.
     
 0.676
KXB93156.1
KEGG: cst:CLOST_0172 1.6e-146 NADH oxidase (noxase); Psort location: Cytoplasmic, score: 9.97.
   
    0.643
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
   
    0.643
KXB92712.1
Putative serine/threonine-protein kinase PrkC; KEGG: med:MELS_1756 2.1e-208 kinase domain protein; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 7.88.
  
    0.515
KXB92714.1
KEGG: med:MELS_1754 1.9e-86 ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 9.97.
  
    0.509
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
     
 0.484
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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