STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB92377.1ABC transporter, substrate-binding protein; KEGG: saj:SaurJH9_2430 1.5e-30 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the bacterial solute-binding protein 9 family. (306 aa)    
Predicted Functional Partners:
KXB92378.1
ABC transporter, ATP-binding protein; KEGG: med:MELS_0725 1.5e-72 ABC transporter; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.998
KXB92379.1
KEGG: apb:SAR116_2225 3.0e-26 zinc ABC transporter membrane spanning protein K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.997
KXB90616.1
Putative permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.721
KXB90615.1
CobW/P47K family protein; KEGG: reh:H16_A3373 1.0e-19 h16_A3373; G3E family GTPase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.674
KXB92380.1
Transcriptional regulator, Fur family; KEGG: mct:MCR_0333 2.3e-10 fur; ferric uptake regulation protein Fur K03711; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family.
 
  
 0.671
rpsN
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.591
KXB91941.1
Putative ferrichrome ABC transporter, ATP-binding protein FhuC; KEGG: ssg:Selsp_2252 7.4e-62 Iron-chelate-transporting ATPase K02013; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.505
KXB90546.1
KEGG: med:MELS_0569 0. phosphoribosylformylglycinamidine synthase; K01952 phosphoribosylformylglycinamidine synthase; Psort location: CytoplasmicMembrane, score: 8.46.
     
 0.489
KXB90846.1
Putative ferrichrome ABC transporter, ATP-binding protein FhuC; KEGG: med:MELS_1564 7.5e-53 iron(III) dicitrate transport ATP-binding protein FecE; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
    
 0.432
KXB91083.1
GTP cyclohydrolase II; KEGG: med:MELS_0145 2.1e-87 riboflavin biosynthesis protein ribBA; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Psort location: Cytoplasmic, score: 9.97.
      
 0.414
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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