STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB91887.1Hypothetical protein; KEGG: ova:OBV_35240 2.1e-07 putative glycoside hydrolase; Psort location: CytoplasmicMembrane, score: 9.82. (367 aa)    
Predicted Functional Partners:
KXB91938.1
Hypothetical protein.
  
 0.914
KXB91888.1
Hypothetical protein.
       0.773
KXB92685.1
KEGG: bai:BAA_0989 1.5e-56 csaB; polysaccharide pyruvyl transferase CsaB; Psort location: Cytoplasmic, score: 8.96.
  
     0.724
KXB90897.1
Hypothetical protein; KEGG: bmd:BMD_1480 5.0e-43 family 18 glycosyl hydrolase; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
  0.701
KXB90066.1
Hemagglutinin; KEGG: eci:UTI89_C1627 6.7e-11 entS; EntS/YbdA MFS transporter K12516.
 
 
 0.687
KXB90188.1
Putative stage III sporulation protein E; KEGG: reh:H16_A1582 8.4e-109 h16_A1582; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.648
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.634
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.631
KXB91889.1
Hypothetical protein.
       0.615
KXB91886.1
L-asparaginase, type II; KEGG: med:MELS_1214 7.1e-80 L-asparaginase; K01424 L-asparaginase; Psort location: Cytoplasmic, score: 9.26.
       0.553
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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