STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB91693.1A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. (355 aa)    
Predicted Functional Partners:
KXB91704.1
Exodeoxyribonuclease III; KEGG: med:MELS_1913 2.7e-112 exodeoxyribonuclease III; K01142 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 9.97.
    
 0.959
KXB92356.1
KEGG: sis:LS215_2903 1.8e-21 sugar fermentation stimulation protein A K06206; Psort location: Cytoplasmic, score: 9.97; Belongs to the SfsA family.
 
    0.920
KXB92257.1
Hydrolase, NUDIX family; KEGG: afn:Acfer_1865 2.7e-39 NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase.
 
 
 0.845
KXB91694.1
Ser/Thr phosphatase family protein; KEGG: bsr:I33_1584 8.2e-20 YkuE K07098; Psort location: CytoplasmicMembrane, score: 10.00.
       0.802
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
 
 
0.681
KXB90512.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
 
 0.660
KXB91692.1
Hypothetical protein; KEGG: bce:BC0237 1.8e-51 galactose-1-phosphate uridylyltransferase.
       0.540
KXB91690.1
Hypothetical protein.
       0.529
KXB91691.1
Ser/Thr phosphatase family protein; KEGG: cbn:CbC4_0532 7.4e-46 metallophosphoesterase K07099; Psort location: Cytoplasmic, score: 8.96.
       0.529
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.485
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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