Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXB91919.1 | atpA | HMPREF3182_00658 | HMPREF3182_00736 | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.871 |
| KXB91919.1 | atpB | HMPREF3182_00658 | HMPREF3182_00732 | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.887 |
| KXB91919.1 | atpC | HMPREF3182_00658 | HMPREF3182_00739 | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.859 |
| KXB91919.1 | atpD | HMPREF3182_00658 | HMPREF3182_00738 | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.871 |
| KXB91919.1 | atpE | HMPREF3182_00658 | HMPREF3182_00733 | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.888 |
| KXB91919.1 | atpG | HMPREF3182_00658 | HMPREF3182_00737 | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.873 |
| KXB91919.1 | atpH | HMPREF3182_00658 | HMPREF3182_00735 | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.460 |
| atpA | KXB91919.1 | HMPREF3182_00736 | HMPREF3182_00658 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | 0.871 |
| atpA | atpB | HMPREF3182_00736 | HMPREF3182_00732 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.999 |
| atpA | atpC | HMPREF3182_00736 | HMPREF3182_00739 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| atpA | atpD | HMPREF3182_00736 | HMPREF3182_00738 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpE | HMPREF3182_00736 | HMPREF3182_00733 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | atpF | HMPREF3182_00736 | HMPREF3182_00734 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.999 |
| atpA | atpG | HMPREF3182_00736 | HMPREF3182_00737 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | atpH | HMPREF3182_00736 | HMPREF3182_00735 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | rpsB | HMPREF3182_00736 | HMPREF3182_01168 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Ribosomal protein S2; KEGG: apb:SAR116_0519 1.8e-60 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family. | 0.745 |
| atpA | tsf | HMPREF3182_00736 | HMPREF3182_01167 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.825 |
| atpB | KXB91919.1 | HMPREF3182_00732 | HMPREF3182_00658 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | DHHA2 domain protein; KEGG: med:MELS_1892 4.2e-146 inorganic diphosphatase PpaC; K15986 manganese-dependent inorganic pyrophosphatase; Psort location: Cytoplasmic, score: 9.97. | 0.887 |
| atpB | atpA | HMPREF3182_00732 | HMPREF3182_00736 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpB | atpC | HMPREF3182_00732 | HMPREF3182_00739 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
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