STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB91562.1TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 5.7e-10 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 10.00. (804 aa)    
Predicted Functional Partners:
KXB92659.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 9.4e-05 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.92.
  
     0.747
KXB90096.1
TonB-dependent receptor; KEGG: xfa:XF0818 7.5e-10 endo-1,4-beta-glucanase; K01179 endoglucanase.
  
   0.660
KXB91938.1
Hypothetical protein.
    
 
 0.620
KXB90200.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 3.2e-07 fadD; long-chain-fatty-acid--CoA ligase K12543; Psort location: OuterMembrane, score: 9.92.
  
   
 0.612
KXB90763.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 9.0e-25 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.606
KXB90762.1
Putative multidrug efflux pump BpeF; KEGG: rcp:RCAP_rcc02895 5.6e-190 mdtF; multidrug resistance protein MdtF K03296; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
     0.551
KXB91561.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: med:MELS_2028 3.1e-189 mycothione reductase; K00382 dihydrolipoamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.533
KXB92661.1
TonB family domain protein.
   
   0.496
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.476
KXB90098.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: pfe:PSF113_4167 3.4e-18 exbB; protein ExbB/TolQ K03561; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.421
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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