STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB91597.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (189 aa)    
Predicted Functional Partners:
KXB91599.1
NlpC/P60 family protein; KEGG: bpu:BPUM_3255 2.6e-23 ywtD; C40 family peptidase.
 
  
 0.978
KXB91598.1
Hypothetical protein; KEGG: smp:SMAC_06805 1.6e-06 hypothetical protein; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.954
KXB91600.1
Hypothetical protein.
 
    0.948
KXB91029.1
Hypothetical protein.
 
    0.784
KXB91596.1
Hypothetical protein.
       0.547
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
  
 0.503
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
    
   0.431
KXB91592.1
Putative phage terminase, large subunit; KEGG: nca:Noca_4657 6.1e-38 DnaB domain-containing protein; K02314 replicative DNA helicase.
     
 0.416
Your Current Organism:
Veillonellaceae bacterium KA00182
NCBI taxonomy Id: 1588748
Other names: V. bacterium KA00182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.